STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_2167Pyridoxal phosphate-dependent deaminase, putative. (327 aa)    
Predicted Functional Partners:
F3D3_0754
Pyruvate-flavodoxin oxidoreductase.
     
 0.784
F3D3_1065
O-succinylhomoserine sulfhydrylase (EC 2.5.1.48).
     
 0.777
F3D3_2600
2-oxoglutarate oxidoreductase alpha subunit.
     
 0.701
F3D3_1027
Aspartate aminotransferase.
    
  0.677
F3D3_1164
Aspartate aminotransferase.
    
  0.677
hemL
Glutamate-1-semialdehyde aminotransferase.
    
  0.599
F3D3_0809
Cysteine synthase.
    
 0.579
F3D3_1525
2-amino-4-ketopentanoate thiolase, beta subunit.
    
 0.579
F3D3_3920
2-amino-4-ketopentanoate thiolase beta subunit.
    
 0.579
F3D3_1215
Aspartate aminotransferase.
     
 0.564
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.