STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_2375Acetobutylicum phosphotransbutyrylase. (166 aa)    
Predicted Functional Partners:
F3D3_3246
5-methyltetrahydrofolate-homocysteine methyltransferase.
   
 
  0.876
F3D3_2376
Exopolysaccharide biosynthesis glycosyltransferase EpsF.
       0.776
F3D3_2374
UDP-N-acetylglucosamine 4,6-dehydratase.
 
     0.729
F3D3_2377
Polysaccharide biosynthesis related protein.
       0.686
folD
Methylenetetrahydrofolate NADP+ dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
  0.616
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.590
F3D3_0595
Similar to Glycine cleavage system H protein.
    
  0.588
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
    
  0.588
F3D3_3245
Methionine synthase activation domain.
   
 
  0.586
F3D3_2378
Small multidrug export protein (qacE) homolog.
       0.556
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.