STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_2423TPR-repeat-containing proteins. (940 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.769
F3D3_2424
Surface-layer 125 kDa protein precursor.
 
     0.764
F3D3_2435
Hypothetical protein.
  
     0.758
F3D3_0754
Pyruvate-flavodoxin oxidoreductase.
   
   0.750
F3D3_2631
Hypothetical protein.
  
     0.724
F3D3_2422
Capsular polysaccharide biosynthesis protein.
     
 0.715
F3D3_2425
Outer cell wall protein precursor.
 
     0.709
F3D3_2437
Hypothetical protein.
  
     0.692
F3D3_3194
Hypothetical protein.
  
     0.688
F3D3_1636
Adenylate cyclase.
    
  0.683
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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