STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_30034-carboxymuconolactone decarboxylase. (285 aa)    
Predicted Functional Partners:
F3D3_0754
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.805
F3D3_3725
Adenylosuccinate lyase; Predicted queuosine-regulated ECF transporter; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.724
F3D3_0308
Butyrate-acetoacetate CoA-transferase subunit A.
  
 
 0.631
F3D3_1231
3-oxoacid CoA-transferase A subunit.
  
 
 0.631
F3D3_0307
Butyrate-acetoacetate CoA-transferase subunit B.
  
 
 0.629
F3D3_0547
Butyrate-acetoacetate CoA-transferase subunit B.
  
 
 0.629
F3D3_1230
succinyl-CoA 3-ketoacid-coenzyme A transferase subunit B.
  
 
 0.629
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
  
 
  0.610
F3D3_1709
Aromatic hydrocarbon catabolism protein.
 
 
 0.596
F3D3_4608
Hydrolase; Alpha/beta fold family.
 
 
 0.571
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.