STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_3122Hypothetical protein. (116 aa)    
Predicted Functional Partners:
F3D3_0754
Pyruvate-flavodoxin oxidoreductase.
    
  0.784
F3D3_3121
Hypothetical protein.
       0.773
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 0.712
F3D3_2973
Glutamate synthase [NADPH] large chain.
   
 
 0.692
F3D3_0259
glutamate--UDP-2-acetamido-2-deoxy-D-ribohex-3- uluronic acid aminotransferase; PLP cofactor; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.605
F3D3_2407
Bacillosamine/legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.605
F3D3_2902
Lipopolysaccharide biosynthesis protein RffA; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.605
gatB
aspartyl-tRNA(Asn) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
    
  0.574
F3D3_2798
Chorismate mutase I; Prephenate dehydratase (EC 4.2.1.51).
    
  0.565
F3D3_3463
Aliphatic amidase AmiE.
  
 0.556
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.