STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_31584-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. (293 aa)    
Predicted Functional Partners:
F3D3_3159
UbiD family decarboxylase associated with menaquinone via futalosine; Belongs to the UbiD family.
 
  
 0.992
ubiX
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
  
 0.988
F3D3_3155
Binding-protein-dependent transport systems inner membrane component.
     0.956
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.899
F3D3_1026
Subunit glycolate dehydrogenase GlcD.
    
 0.884
F3D3_3160
Putative thiamine biosynthesis protein.
 
   
 0.841
F3D3_1981
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
 
 
 0.785
F3D3_0614
Isopentenyl-diphosphate delta-isomerase.
  
 
 0.734
F3D3_3156
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component.
     
 0.708
F3D3_2459
3,5-diaminohexanoate dehydrogenase.
  
 
 0.707
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.