STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_3168Potassium voltage-gated channel subfamily KQT; Possible potassium channel, VIC family. (157 aa)    
Predicted Functional Partners:
F3D3_1007
Potassium uptake protein TrkH.
 
 0.921
F3D3_4441
Integral membrane component of potassium uptake proteim KtrB.
  
 0.900
cinA
Molybdopterin binding motif, CinA N-terminal domain; C-terminal domain of CinA type S; Belongs to the CinA family.
    
 0.693
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.613
F3D3_3380
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.558
F3D3_0629
Large subunit molybdopterin converting factor.
   
    0.535
F3D3_0278
Flagellar basal-body rod protein FlgG.
    
   0.503
F3D3_0279
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
    
   0.503
F3D3_0114
Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3).
  
  
 0.500
F3D3_1484
Uroporphyrinogen-III synthase (EC 4.2.1.75).
  
    0.477
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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