Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F3D3_0794 | F3D3_1118 | F3D3_0794 | F3D3_1118 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Pyridine nucleotide-disulfide oxidoreductase; NADH dehydrogenase. | 0.958 |
F3D3_0794 | F3D3_3876 | F3D3_0794 | F3D3_3876 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | LemA protein. | 0.445 |
F3D3_0794 | rpmE | F3D3_0794 | F3D3_0340 | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Largue subunit ribosomal protein L31p; Binds the 23S rRNA. | 0.819 |
F3D3_1118 | F3D3_0794 | F3D3_1118 | F3D3_0794 | Pyridine nucleotide-disulfide oxidoreductase; NADH dehydrogenase. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.958 |
F3D3_1118 | F3D3_3876 | F3D3_1118 | F3D3_3876 | Pyridine nucleotide-disulfide oxidoreductase; NADH dehydrogenase. | LemA protein. | 0.425 |
F3D3_1118 | rpmE | F3D3_1118 | F3D3_0340 | Pyridine nucleotide-disulfide oxidoreductase; NADH dehydrogenase. | Largue subunit ribosomal protein L31p; Binds the 23S rRNA. | 0.812 |
F3D3_3875 | F3D3_3876 | F3D3_3875 | F3D3_3876 | Hypothetical protein. | LemA protein. | 0.503 |
F3D3_3875 | F3D3_3877 | F3D3_3875 | F3D3_3877 | Hypothetical protein. | threonyl-tRNA synthetase. | 0.499 |
F3D3_3876 | F3D3_0794 | F3D3_3876 | F3D3_0794 | LemA protein. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.445 |
F3D3_3876 | F3D3_1118 | F3D3_3876 | F3D3_1118 | LemA protein. | Pyridine nucleotide-disulfide oxidoreductase; NADH dehydrogenase. | 0.425 |
F3D3_3876 | F3D3_3875 | F3D3_3876 | F3D3_3875 | LemA protein. | Hypothetical protein. | 0.503 |
F3D3_3876 | F3D3_3877 | F3D3_3876 | F3D3_3877 | LemA protein. | threonyl-tRNA synthetase. | 0.923 |
F3D3_3876 | F3D3_3878 | F3D3_3876 | F3D3_3878 | LemA protein. | Rhamnogalacturonan acetylesterase. | 0.480 |
F3D3_3876 | rpmE | F3D3_3876 | F3D3_0340 | LemA protein. | Largue subunit ribosomal protein L31p; Binds the 23S rRNA. | 0.435 |
F3D3_3877 | F3D3_3875 | F3D3_3877 | F3D3_3875 | threonyl-tRNA synthetase. | Hypothetical protein. | 0.499 |
F3D3_3877 | F3D3_3876 | F3D3_3877 | F3D3_3876 | threonyl-tRNA synthetase. | LemA protein. | 0.923 |
F3D3_3877 | F3D3_3878 | F3D3_3877 | F3D3_3878 | threonyl-tRNA synthetase. | Rhamnogalacturonan acetylesterase. | 0.462 |
F3D3_3878 | F3D3_3876 | F3D3_3878 | F3D3_3876 | Rhamnogalacturonan acetylesterase. | LemA protein. | 0.480 |
F3D3_3878 | F3D3_3877 | F3D3_3878 | F3D3_3877 | Rhamnogalacturonan acetylesterase. | threonyl-tRNA synthetase. | 0.462 |
rpmE | F3D3_0794 | F3D3_0340 | F3D3_0794 | Largue subunit ribosomal protein L31p; Binds the 23S rRNA. | CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.819 |
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