STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_4119Transcriptional regulator; MerR family. (179 aa)    
Predicted Functional Partners:
F3D3_2422
Capsular polysaccharide biosynthesis protein.
  
 
 0.970
F3D3_2515
Transcriptional regulator.
 
 0.894
F3D3_4221
Transcriptional regulator; AraC family.
 
 0.875
F3D3_0897
DNA-binding response regulator, AraC family.
  
 0.856
F3D3_4117
Spermidine putrescine ABC transporter permease component PotB.
 
    0.853
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 0.821
F3D3_4116
Spermidine putrescine ABC transporter permease component PotC.
 
     0.818
F3D3_3463
Aliphatic amidase AmiE.
  
 
 0.798
F3D3_4115
ABC transporter, periplasmic spermidine putrescine-binding protein PotD.
 
   
 0.795
F3D3_2374
UDP-N-acetylglucosamine 4,6-dehydratase.
  
 
 0.794
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.