STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_4454Oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA. (529 aa)    
Predicted Functional Partners:
F3D3_4449
Dipeptide transport system permease protein DppB.
 0.947
F3D3_4448
Dipeptide transport system permease protein DppC.
 0.943
F3D3_3566
Dipeptide transport system permease protein DppB.
 0.919
F3D3_1091
Dipeptide transport system permease protein DppB.
 0.907
F3D3_1169
Dipeptide transport system permease protein DppB.
 0.906
F3D3_3567
Dipeptide transport system permease protein DppC.
 0.905
F3D3_3578
Oligopeptide transport system permease protein OppB.
 0.905
F3D3_0921
Dipeptide transport system permease protein DppB.
 0.904
F3D3_4142
Dipeptide transport system permease protein DppC.
 0.904
F3D3_1170
Dipeptide transport system permease protein DppC.
 0.903
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.