STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_4673Peptidase; M23/M37 family. (228 aa)    
Predicted Functional Partners:
F3D3_4672
Hypothetical protein.
 
     0.788
F3D3_4529
Flagellar motor switch protein FliN.
   
 
 0.781
F3D3_4671
Mobile element protein.
       0.697
F3D3_4530
Flagellar motor switch protein FliM.
    
 
 0.672
F3D3_4674
Hypothetical protein.
       0.661
F3D3_4158
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.575
F3D3_2925
ABC transporter permease protein.
 
     0.491
F3D3_0255
Flagellin protein FlaA; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
    
 
 0.487
F3D3_0263
Flagellar hook-associated protein FlgL.
    
 
 0.487
F3D3_1608
Flagellin protein FlaA.
    
 
 0.487
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.