STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_4678Nitroreductase family protein. (204 aa)    
Predicted Functional Partners:
F3D3_1484
Uroporphyrinogen-III synthase (EC 4.2.1.75).
  
 
 0.760
F3D3_4705
long-chain-fatty-acid-CoA ligase.
   
 
 0.759
F3D3_1760
ABC-type multidrug transport system permease component.
 
  
 0.717
F3D3_1762
ABC-type multidrug transport system permease component.
 
  
 0.717
F3D3_1013
Fumarate reductase flavoprotein subunit.
    
 0.664
F3D3_0756
Iron-sulfur flavoprotein.
 
 
 0.612
birA
Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.610
F3D3_4311
Flavoredoxin.
 
 
 0.602
F3D3_0660
Flavoredoxin.
 
 
 0.594
F3D3_0794
CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.581
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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