STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_4699ATP-dependent DNA helicase RecG. (159 aa)    
Predicted Functional Partners:
F3D3_2343
ATP-dependent DNA helicase RecG.
 
     0.976
F3D3_1156
ATP-dependent DNA helicase.
  
  
  0.757
F3D3_0886
Hypothetical protein.
  
  
  0.684
F3D3_2235
ATP-dependent DNA helicase.
  
  
  0.638
F3D3_2975
ATP-dependent DNA helicase.
  
  
 
0.519
F3D3_1256
Type I restriction-modification system restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.453
F3D3_0497
Putative ATP-binding protein.
  
    0.451
F3D3_1182
Type I restriction-modification system, specificity subunit S.
  
    0.439
F3D3_1257
Type I restriction-modification system specificity subunit S.
  
    0.439
F3D3_0248
Predicted hydrolase; HAD superfamily.
   
    0.414
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
Server load: low (12%) [HD]