STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F3D3_4753Mobile element protein; Belongs to the 'phage' integrase family. (271 aa)    
Predicted Functional Partners:
F3D3_1321
Mobile element protein.
 
     0.631
F3D3_3061
Mobile element protein.
 
     0.631
F3D3_0640
Mobile element protein.
     0.630
F3D3_1723
Mobile element protein.
     0.630
F3D3_4662
Mobile element protein.
     0.630
F3D3_0754
Pyruvate-flavodoxin oxidoreductase.
    
  0.623
F3D3_3171
Mobile element protein.
 
     0.614
F3D3_1320
Mobile element protein.
  
     0.591
F3D3_0561
Mobile element protein.
 
     0.581
F3D3_4752
Hypothetical protein.
       0.446
Your Current Organism:
Fusibacter sp. 3D3
NCBI taxonomy Id: 1048380
Other names: F. sp. 3D3, Fusibacter sp. 3-D3-R-P8ASC2010, Fusibacter sp. ATCC BAA-2418
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.