STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_04210Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)    
Predicted Functional Partners:
EL17_04215
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.695
EL17_14505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
EL17_04235
Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.647
EL17_04205
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.637
EL17_02280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.632
EL17_04230
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.557
EL17_04220
Photosynthetic protein synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
EL17_03710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
EL17_00170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.516
EL17_07900
Outer membrane chaperone Skp; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.505
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.