STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_07900Outer membrane chaperone Skp; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)    
Predicted Functional Partners:
EL17_07890
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.707
secE
Preprotein translocase; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
    0.682
EL17_04150
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.669
EL17_04415
DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
EL17_16755
PspC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.593
EL17_07910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.580
EL17_07090
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.568
EL17_17905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.533
EL17_07895
Deoxyhypusine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.527
EL17_15925
Membrane receptor RagA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.