STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_09225Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (914 aa)    
Predicted Functional Partners:
EL17_09220
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
EL17_09230
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
     0.908
EL17_08970
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.884
EL17_08900
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.790
EL17_09215
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
EL17_09205
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.784
EL17_08965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.782
EL17_09090
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
EL17_09100
Glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
EL17_09080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.