STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_13005Prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
EL17_19525
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
 
  
 0.973
EL17_12040
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.676
EL17_12600
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
EL17_03845
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
EL17_05410
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
EL17_01410
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
EL17_13010
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.608
EL17_15195
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.589
EL17_11910
Gliding motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
EL17_05390
Polyprenyl synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
 
 
 0.581
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.