STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_13130Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
EL17_11380
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.853
EL17_13135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
EL17_17200
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
  
 
  0.692
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.691
EL17_16045
Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.575
EL17_13120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
EL17_13125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.548
EL17_01595
Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.460
EL17_04270
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.460
EL17_04275
Quinol:cytochrome C oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.460
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.