STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_18930TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (781 aa)    
Predicted Functional Partners:
EL17_18925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.845
EL17_18920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.675
EL17_01725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.624
EL17_02915
Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.580
EL17_05190
Phosphatidic acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.549
EL17_12860
Haloperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.544
EL17_07400
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
EL17_07025
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
EL17_16540
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
ruvB
ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
 
      0.485
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.