STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_19505Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)    
Predicted Functional Partners:
panD
Aspartate decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.806
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
       0.717
EL17_19510
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.681
EL17_04465
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
EL17_19490
Glycogen synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
EL17_19485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
EL17_04470
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.492
EL17_04455
Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
EL17_05795
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
EL17_19515
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.480
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.