STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL17_22020Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
EL17_22025
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.973
EL17_22015
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.962
EL17_21955
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.675
EL17_09245
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.674
EL17_21945
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.655
xylA
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family.
     
 0.475
EL17_22030
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.450
EL17_08945
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.424
EL17_22305
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.414
EL17_08895
Alpha-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Anditalea andensis
NCBI taxonomy Id: 1048983
Other names: A. andensis, CICC 10485, Cytophagaceae bacterium ANESC-S, NCCB 100412, strain ANESC-S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.