STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQA52229.1Putative cyclohexyl-isocyanide hydratase. (231 aa)    
Predicted Functional Partners:
EQA53425.1
HAD hydrolase, REG-2-like, family IA.
  
    0.628
EQA54398.1
Putative membrane protein.
       0.543
EQA55194.1
Transcriptional regulator, TetR family.
  
     0.526
EQA53049.1
Transcriptional regulator, TetR family.
  
     0.473
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.438
EQA51985.1
Isochorismatase family protein.
 
    0.432
EQA53933.1
Transcriptional regulator, TetR family.
  
     0.415
EQA54600.1
Acetyltransferase, GNAT domain protein.
   
    0.412
Your Current Organism:
Leptospira kmetyi
NCBI taxonomy Id: 1049970
Other names: L. kmetyi serovar Malaysia str. Bejo-Iso9, Leptospira kmetyi serovar Malaysia str. Bejo-Iso9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.