STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ41554.1Tetratricopeptide repeat protein. (350 aa)    
Predicted Functional Partners:
EJZ41664.1
Hypothetical protein.
       0.733
EJZ40876.1
Restriction endonuclease.
 
  
 0.728
EJZ41675.1
ABC transporter, ATP-binding protein.
       0.725
EJZ41661.1
CcmB protein.
       0.725
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.707
EJZ43684.1
Hypothetical protein.
  
 
   0.693
EJZ43468.1
HAMP domain protein.
    
 0.692
EJZ40486.1
PF07787 family protein.
  
     0.691
EJZ43647.1
Putative lipoprotein.
  
   
 0.691
EJZ41905.1
Outer membrane efflux protein.
  
     0.690
Your Current Organism:
Leptospira licerasiae
NCBI taxonomy Id: 1049971
Other names: L. licerasiae str. MMD4847, Leptospira licerasiae str. MMD4847
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.