STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384195_00082Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_000384195_00631
Unannotated protein.
   
   0.880
GCA_000384195_00995
Unannotated protein.
    
 
 0.806
GCA_000384195_00275
Unannotated protein.
   
   0.662
GCA_000384195_01164
Unannotated protein.
  
   0.626
GCA_000384195_01030
Unannotated protein.
  
  
 0.553
GCA_000384195_01079
Unannotated protein.
    
 0.549
GCA_000384195_01567
Unannotated protein.
    
 0.549
GCA_000384195_00685
Unannotated protein.
    
 0.514
GCA_000384195_01338
Unannotated protein.
    
 0.508
GCA_000384195_01575
Unannotated protein.
    
 0.491
Your Current Organism:
Allobaculum stercoricanis
NCBI taxonomy Id: 1050201
Other names: A. stercoricanis DSM 13633, Allobaculum stercoricanis DSM 13633, Allobaculum stercoricanis str. DSM 13633, Allobaculum stercoricanis strain DSM 13633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.