STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384195_00087Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_000384195_00088
Unannotated protein.
  
 0.991
GCA_000384195_00743
Unannotated protein.
   
 
 0.853
GCA_000384195_01466
Unannotated protein.
  
 
 0.835
GCA_000384195_00226
Unannotated protein.
    
 
 0.834
GCA_000384195_01432
Unannotated protein.
   
 
 0.833
GCA_000384195_01173
Unannotated protein.
   
 
 0.830
GCA_000384195_01473
Unannotated protein.
   
 
 0.830
GCA_000384195_01448
Unannotated protein.
    
 
 0.827
GCA_000384195_01472
Unannotated protein.
   
 
 0.827
GCA_000384195_01434
Unannotated protein.
   
 
 0.826
Your Current Organism:
Allobaculum stercoricanis
NCBI taxonomy Id: 1050201
Other names: A. stercoricanis DSM 13633, Allobaculum stercoricanis DSM 13633, Allobaculum stercoricanis str. DSM 13633, Allobaculum stercoricanis strain DSM 13633
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.