STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000384195_01749Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_000384195_01172
Unannotated protein.
   
 
 0.934
GCA_000384195_01750
Unannotated protein.
  
  
 0.906
GCA_000384195_01751
Unannotated protein.
 
  
 0.888
GCA_000384195_01752
Unannotated protein.
     
 0.693
GCA_000384195_01740
Unannotated protein.
  
  
 0.623
GCA_000384195_00735
Unannotated protein.
  
   
 0.611
GCA_000384195_00897
Unannotated protein.
   
  
 0.556
GCA_000384195_01747
Unannotated protein.
 
     0.551
GCA_000384195_01462
Unannotated protein.
   
    0.546
GCA_000384195_01458
Unannotated protein.
   
    0.535
Your Current Organism:
Allobaculum stercoricanis
NCBI taxonomy Id: 1050201
Other names: A. stercoricanis DSM 13633, Allobaculum stercoricanis DSM 13633, Allobaculum stercoricanis str. DSM 13633, Allobaculum stercoricanis strain DSM 13633
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.