STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PurRLacI family transcription regulator. (353 aa)    
Predicted Functional Partners:
GltB
Glutamate synthase large subunit.
    
 
 0.842
gltB
Glutamate synthase large subunit.
    
 
 0.842
lacI-2
LacI family transcription regulator.
  
     0.770
lacI-5
LacI family transcription regulator.
 
  
 0.457
iolG-2
Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
       0.443
iolI
Hypothetical protein.
       0.443
iolH
Myo-inositol catabolism protein.
  
    0.440
PtsH
Phosphocarrier protein HPr.
   
 
 0.437
Your Current Organism:
Agrobacterium tumefaciens
NCBI taxonomy Id: 1050720
Other names: A. tumefaciens F2, Agrobacterium tumefaciens F2, Agrobacterium tumefaciens str. F2, Agrobacterium tumefaciens strain F2, Rhizobium radiobacter F2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.