STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7B24_008759Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
D7B24_003875
Uncharacterized protein.
   
 0.515
D7B24_001758
Uncharacterized protein.
    
 0.511
D7B24_008317
Uncharacterized protein.
    
 0.511
D7B24_002876
BZIP domain-containing protein.
    
  0.499
GDE1
Glycerophosphocholine phosphodiesterase.
   
 0.478
RGA2
Rho-type gtpase-activating protein.
    
 0.476
PHO81
Phosphate system positive regulatory protein pho81.
   
 0.433
D7B24_006690
UBA domain-containing protein.
   
  0.432
RRN7
Pol I core factor CF.
    
  0.411
USO1
Vesicle-mediated ER to Golgi transport protein.
    
  0.411
Your Current Organism:
Verticillium nonalfalfae
NCBI taxonomy Id: 1051616
Other names: CBS 130339, NRRL 54791, PD592, UC 1953898, V. nonalfalfae, Verticillium sp. PI-2011d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.