STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIW16245.1Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1042 aa)    
Predicted Functional Partners:
AIW16771.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.951
AIW15528.1
Spindolin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.937
AIW13370.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.870
gbpA
N-acetylglucosamine-binding protein A; Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin. Belongs to the GbpA family.
 
  
 0.863
AIW13072.1
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
AIW13540.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.847
AIW15891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.847
AIW15714.1
Chitodextrinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.839
AIW14193.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.778
AIW15585.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.766
Your Current Organism:
Vibrio tubiashii
NCBI taxonomy Id: 1051646
Other names: V. tubiashii ATCC 19109, Vibrio tubiashii ATCC 19109, Vibrio tubiashii LMG 10396, Vibrio tubiashii NBRC 15644, Vibrio tubiashii str. ATCC 19109, Vibrio tubiashii strain ATCC 19109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.