STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3QCG6FHA domain-containing protein. (329 aa)    
Predicted Functional Partners:
A0A0C3KSG0
RNA helicase.
    
 0.816
A0A0C3Q1L1
G-patch domain-containing protein.
    
 
 0.785
A0A0C3KBS1
CSTF2_hinge domain-containing protein.
   
   0.778
A0A0C3KB61
Sas10 domain-containing protein.
    
   0.777
A0A0C3LK03
MI domain-containing protein.
    
   0.777
A0A0C3PYH2
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
    
   0.777
A0A0C3QDQ9
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.777
A0A0C3QFL8
Uncharacterized protein.
    
 
 0.777
A0A0C3QFP6
S4 RNA-binding domain-containing protein.
    
   0.777
A0A0C3QK55
Uncharacterized protein.
    
   0.777
Your Current Organism:
Tulasnella calospora
NCBI taxonomy Id: 1051891
Other names: T. calospora MUT 4182, Tulasnella calospora AL13/4D, Tulasnella calospora MUT 4182
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