Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fbiB_1Coenzyme F420:L-glutamate ligase. (450 aa)    
Predicted Functional Partners:
cofD
2-phospho-L-lactate transferase.
 
 
 0.999
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.912
AMY51410.1
Hypothetical protein.
      0.904
fbiC
FO synthase.
 
   
 0.819
AMY52320.1
Putative nitroreductase.
 
  
 0.788
AMY51567.1
Putative coenzyme F420-dependent oxidoreductase.
 
  
 0.778
fgd_2
F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
 
  
 0.769
fgd1_2
F420-dependent glucose-6-phosphate dehydrogenase.
 
  
 0.749
fgd1_4
F420-dependent glucose-6-phosphate dehydrogenase.
 
  
 0.746
AMY55285.1
Putative nitroreductase.
 
  
 0.745
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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