Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rmlDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (343 aa)    
Predicted Functional Partners:
rmlC_1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 0.997
rmlC_2
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 0.997
rmlB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.994
wbbL_1
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
  
 0.978
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
  
 0.966
rmlA_1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.963
rmlA_2
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.963
wbbL_2
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
  
 0.961
wbiB_2
dTDP-L-rhamnose 4-epimerase.
  
 0.937
wbbL_3
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
  
 0.822
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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