Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lytR_1Transcriptional regulator LytR. (476 aa)    
Predicted Functional Partners:
aftB
Terminal beta-(1->2)-arabinofuranosyltransferase.
  
  
 0.926
fbpA_5
Diacylglycerol acyltransferase/mycolyltransferase Ag85A.
  
  
  0.921
fbpB_1
Diacylglycerol acyltransferase/mycolyltransferase Ag85B.
  
  
  0.919
fbpB_2
Diacylglycerol acyltransferase/mycolyltransferase Ag85B.
  
  
  0.919
fbpA_2
Diacylglycerol acyltransferase/mycolyltransferase Ag85A.
  
  
  0.917
fbpA_4
Diacylglycerol acyltransferase/mycolyltransferase Ag85A.
  
  
 0.915
fbpC_2
Diacylglycerol acyltransferase/mycolyltransferase Ag85C.
  
  
  0.914
AMY51415.1
Hypothetical protein.
     
 0.812
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
 
     0.711
wbbL_1
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
   
 0.696
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.