deaD_1 protein (Rhodococcus fascians D188) - STRING interaction network

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[Homology]

Score

deaD_1

ATP-dependent RNA helicase DeaD. (1513 aa)

Predicted Functional Partners:

nei1_1

0.942

nei1_2

0.706

radA

0.598

AMY51462.1

0.546

nei1_3

0.512

polC

0.503

AMY51461.1

0.493

ligC

0.485

fpg2

0.427

mutM

0.427

Your Current Organism:

Rhodococcus fascians D188

NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMY51461.1	AMY51462.1	A3L23_00100	A3L23_00101	Hypothetical protein.	Hypothetical protein.	0.671
AMY51461.1	deaD_1	A3L23_00100	A3L23_00102	Hypothetical protein.	ATP-dependent RNA helicase DeaD.	0.493
AMY51461.1	nei1_1	A3L23_00100	A3L23_00103	Hypothetical protein.	Endonuclease 8 1.	0.407
AMY51462.1	AMY51461.1	A3L23_00101	A3L23_00100	Hypothetical protein.	Hypothetical protein.	0.671
AMY51462.1	deaD_1	A3L23_00101	A3L23_00102	Hypothetical protein.	ATP-dependent RNA helicase DeaD.	0.546
AMY51462.1	nei1_1	A3L23_00101	A3L23_00103	Hypothetical protein.	Endonuclease 8 1.	0.441
deaD_1	AMY51461.1	A3L23_00102	A3L23_00100	ATP-dependent RNA helicase DeaD.	Hypothetical protein.	0.493
deaD_1	AMY51462.1	A3L23_00102	A3L23_00101	ATP-dependent RNA helicase DeaD.	Hypothetical protein.	0.546
deaD_1	fpg2	A3L23_00102	A3L23_00635	ATP-dependent RNA helicase DeaD.	Putative formamidopyrimidine-DNA glycosylase-like protein; Belongs to the FPG family.	0.427
deaD_1	ligC	A3L23_00102	A3L23_01523	ATP-dependent RNA helicase DeaD.	DNA ligase C1.	0.485
deaD_1	mutM	A3L23_00102	A3L23_04140	ATP-dependent RNA helicase DeaD.	Formamidopyrimidine-DNA glycosylase.	0.427
deaD_1	nei1_1	A3L23_00102	A3L23_00103	ATP-dependent RNA helicase DeaD.	Endonuclease 8 1.	0.942
deaD_1	nei1_2	A3L23_00102	A3L23_00923	ATP-dependent RNA helicase DeaD.	Endonuclease 8 1.	0.706
deaD_1	nei1_3	A3L23_00102	A3L23_03703	ATP-dependent RNA helicase DeaD.	Endonuclease 8 1; Belongs to the FPG family.	0.512
deaD_1	polC	A3L23_00102	A3L23_03912	ATP-dependent RNA helicase DeaD.	DNA polymerase III PolC-type.	0.503
deaD_1	radA	A3L23_00102	A3L23_02532	ATP-dependent RNA helicase DeaD.	Hypothetical protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.	0.598
fpg2	deaD_1	A3L23_00635	A3L23_00102	Putative formamidopyrimidine-DNA glycosylase-like protein; Belongs to the FPG family.	ATP-dependent RNA helicase DeaD.	0.427
fpg2	ligC	A3L23_00635	A3L23_01523	Putative formamidopyrimidine-DNA glycosylase-like protein; Belongs to the FPG family.	DNA ligase C1.	0.502
fpg2	mutM	A3L23_00635	A3L23_04140	Putative formamidopyrimidine-DNA glycosylase-like protein; Belongs to the FPG family.	Formamidopyrimidine-DNA glycosylase.	0.928
fpg2	nei1_1	A3L23_00635	A3L23_00103	Putative formamidopyrimidine-DNA glycosylase-like protein; Belongs to the FPG family.	Endonuclease 8 1.	0.799