Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadB_1Putative enoyl-CoA hydratase. (234 aa)    
Predicted Functional Partners:
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
  
 0.827
yxeP
Putative hydrolase YxeP.
       0.776
abgB
P-aminobenzoyl-glutamate hydrolase subunit B; Belongs to the peptidase M20A family.
       0.776
punA
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
   
   0.769
crt_2
Short-chain-enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
   
 0.768
AMY55523.1
Hypothetical protein.
  
 0.759
AMY52364.1
Hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.749
AMY52745.1
Hypothetical protein.
   
 0.719
echA8_1
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
   
 0.718
crt_3
Short-chain-enoyl-CoA hydratase.
  
   
 0.717
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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