Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mprB_1Signal transduction histidine-protein kinase/phosphatase MprB. (294 aa)    
Predicted Functional Partners:
mprA_1
Response regulator MprA.
 
 0.966
AMY55523.1
Hypothetical protein.
  
 
 0.912
mprB_2
Signal transduction histidine-protein kinase/phosphatase MprB.
  
  
 
0.911
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
  
 0.781
AMY53765.1
Hypothetical protein.
  
 
 0.762
todS
Sensor histidine kinase TodS.
  
 
 0.710
htrA
Putative serine protease HtrA.
  
  
 0.556
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.554
pleD_2
Response regulator PleD.
  
 
 0.545
fadB_3
Fatty acid oxidation complex subunit alpha.
   
 0.518
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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