Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY51567.1Putative coenzyme F420-dependent oxidoreductase. (346 aa)    
Predicted Functional Partners:
fbiB_1
Coenzyme F420:L-glutamate ligase.
 
  
 0.778
cofD
2-phospho-L-lactate transferase.
 
   
 0.775
ddn
Deazaflavin-dependent nitroreductase.
  
   
 0.748
AMY55285.1
Putative nitroreductase.
  
   
 0.723
AMY52320.1
Putative nitroreductase.
  
   
 0.706
fgd1_2
F420-dependent glucose-6-phosphate dehydrogenase.
  
     0.701
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.639
fgd1_3
F420-dependent glucose-6-phosphate dehydrogenase.
  
   
 0.634
fbiC
FO synthase.
 
  
 0.630
AMY53123.1
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
  
     0.607
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.