Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mftF_3Putative mycofactocin biosynthesis glycosyltransferase MftF. (433 aa)    
Predicted Functional Partners:
mftE
Putative mycofactocin system creatinine amidohydrolase family protein MftE.
 
  
 0.986
betA
Oxygen-dependent choline dehydrogenase.
  
    0.902
AMY51659.1
Hypothetical protein.
 
   
 0.886
mftC
Putative mycofactocin radical SAM maturase MftC.
 
   
 0.870
AMY55523.1
Hypothetical protein.
  
 
 0.786
acoR_1
Acetoin dehydrogenase operon transcriptional activator AcoR.
  
  
 0.761
AMY51649.1
Hypothetical protein.
       0.757
thcA
EPTC-inducible aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.701
todS
Sensor histidine kinase TodS.
  
 
 0.644
wbbL_2
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
  
 0.598
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.