Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mftD_1Putative mycofactocin system heme/flavin oxidoreductase MftD. (407 aa)    
Predicted Functional Partners:
poxB
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
 
 0.940
mftC
Putative mycofactocin radical SAM maturase MftC.
 
  
 0.924
cfiB_1
2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 
 0.921
lldD_2
Putative L-lactate dehydrogenase.
  
  
 
0.921
cfiB_2
2-oxoglutarate carboxylase small subunit; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 
 0.921
lldD_1
Putative L-lactate dehydrogenase.
  
  
 
0.920
AMY52959.1
Lactate 2-monooxygenase.
  
  
 
0.918
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.917
AMY51659.1
Hypothetical protein.
 
  
 0.905
AMY54468.1
NAD-dependent malic enzyme.
    
 0.905
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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