Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY51668.1Methanol:N,N-dimethyl-4-nitrosoaniline oxidoreductase. (423 aa)    
Predicted Functional Partners:
fdhA
Glutathione-independent formaldehyde dehydrogenase.
 
 
 0.918
fdnI
Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit.
     
  0.900
AMY51666.1
Hypothetical protein.
 
     0.898
lon_1
Lon protease.
 
   
 0.827
amdA
Acetamidase.
    
 0.811
amiF
Formamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.
   
 
  0.800
liaS_1
Sensor histidine kinase LiaS.
 
     0.670
AMY51661.1
Hypothetical protein.
 
     0.581
todS
Sensor histidine kinase TodS.
  
  
 0.573
adhB
Alcohol dehydrogenase 2.
 
    
0.560
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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