Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acdA_3Acyl-CoA dehydrogenase. (380 aa)    
Predicted Functional Partners:
fadB_3
Fatty acid oxidation complex subunit alpha.
  
 0.900
etfA
Electron transfer flavoprotein subunit alpha.
 
 0.899
etfB
Electron transfer flavoprotein subunit beta.
 
 
 0.877
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.809
fadB_5
Fatty acid oxidation complex subunit alpha.
  
 0.803
pcaF
Beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.763
echA8_2
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.756
accD5_2
Putative propionyl-CoA carboxylase beta chain 5.
  
 
 0.750
echA6
Putative enoyl-CoA hydratase echA6; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.748
accC_2
Biotin carboxylase.
  
 
 0.684
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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