Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sdhSerine 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (231 aa)    
Predicted Functional Partners:
xecD
2-(R)-hydroxypropyl-CoM dehydrogenase.
  
 
   0.711
fabG_4
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
   0.699
AMY51809.1
Hypothetical protein.
 
     0.677
limC
(-)-trans-carveol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.669
ephD_5
Putative oxidoreductase EphD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.655
linC_1
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
  
 
   0.653
AMY53462.1
Sepiapterin reductase.
  
     0.635
bdcA
Cyclic-di-GMP-binding biofilm dispersal mediator protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.567
fabG_7
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
   0.458
budC_3
Diacetyl reductase.
  
 
   0.456
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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