Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
puuP_2Putrescine importer PuuP. (526 aa)    
Predicted Functional Partners:
AMY51823.1
Universal stress protein.
 
  
 0.943
AMY51484.1
Universal stress protein.
 
  
 0.716
AMY51699.1
Universal stress protein.
 
  
 0.637
pucR_1
Purine catabolism regulatory protein.
 
     0.601
puo_1
Putrescine oxidase.
 
 
 
 0.561
gdhB
NAD-specific glutamate dehydrogenase.
  
    0.520
AMY52423.1
Hypothetical protein.
   
 0.506
nplT
Neopullulanase.
   
 0.506
ams
Amylosucrase.
   
 0.506
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.506
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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