Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nucANuclease. (271 aa)    
Predicted Functional Partners:
AMY51894.1
Hypothetical protein.
       0.746
rbn_1
Ribonuclease BN.
   
 
 0.736
rbn_2
Ribonuclease BN.
   
 
 0.736
prtS
Protease PrtS; Extracellular zinc metalloprotease.
     0.726
nuoF
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
    0.598
ettA_1
Energy-dependent translational throttle protein EttA.
  
    0.557
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.548
soxA
Sarcosine oxidase subunit alpha.
   
 
 0.483
fadH
2,4-dienoyl-CoA reductase [NADPH].
   
 
 0.475
thcD_1
Rhodocoxin reductase.
   
 
 0.465
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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