rpfB protein (Rhodococcus fascians D188) - STRING interaction network

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Score

rpfB

Resuscitation-promoting factor RpfB. (375 aa)

Predicted Functional Partners:

ksgA

0.972

ycfH

0.782

ripA_2

0.664

AMY55228.1

0.558

metG

0.528

ldtB_2

0.527

ispE

0.514

lpqB

0.511

ctaC

0.501

pmt

0.498

Your Current Organism:

Rhodococcus fascians D188

NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMY55228.1	ksgA	A3L23_03915	A3L23_00537	Putative endopeptidase.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.509
AMY55228.1	ripA_2	A3L23_03915	A3L23_04320	Putative endopeptidase.	Peptidoglycan endopeptidase RipA.	0.652
AMY55228.1	rpfB	A3L23_03915	A3L23_00538	Putative endopeptidase.	Resuscitation-promoting factor RpfB.	0.558
ctaC	rpfB	A3L23_03901	A3L23_00538	Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Resuscitation-promoting factor RpfB.	0.501
ispE	ksgA	A3L23_00534	A3L23_00537	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.941
ispE	rpfB	A3L23_00534	A3L23_00538	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Resuscitation-promoting factor RpfB.	0.514
ispE	ycfH	A3L23_00534	A3L23_00539	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	Putative deoxyribonuclease YcfH.	0.583
ksgA	AMY55228.1	A3L23_00537	A3L23_03915	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Putative endopeptidase.	0.509
ksgA	ispE	A3L23_00537	A3L23_00534	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	0.941
ksgA	metG	A3L23_00537	A3L23_00540	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.	0.690
ksgA	rpfB	A3L23_00537	A3L23_00538	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Resuscitation-promoting factor RpfB.	0.972
ksgA	ycfH	A3L23_00537	A3L23_00539	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	Putative deoxyribonuclease YcfH.	0.793
ldtB_2	lpqB	A3L23_03664	A3L23_00034	L,D-transpeptidase 2.	Lipoprotein LpqB.	0.424
ldtB_2	rpfB	A3L23_03664	A3L23_00538	L,D-transpeptidase 2.	Resuscitation-promoting factor RpfB.	0.527
lpqB	ldtB_2	A3L23_00034	A3L23_03664	Lipoprotein LpqB.	L,D-transpeptidase 2.	0.424
lpqB	pmt	A3L23_00034	A3L23_00545	Lipoprotein LpqB.	Putative dolichyl-phosphate-mannose--protein mannosyltransferase.	0.574
lpqB	rpfB	A3L23_00034	A3L23_00538	Lipoprotein LpqB.	Resuscitation-promoting factor RpfB.	0.511
metG	ksgA	A3L23_00540	A3L23_00537	Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.690
metG	rpfB	A3L23_00540	A3L23_00538	Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.	Resuscitation-promoting factor RpfB.	0.528
metG	ycfH	A3L23_00540	A3L23_00539	Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.	Putative deoxyribonuclease YcfH.	0.950