Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY51946.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
rpmF_1
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
    0.580
rpmE2
50S ribosomal protein L31 type B.
  
    0.576
gltB_1
Glutamate synthase [NADPH] large chain.
  
  
 0.575
gltB_2
Glutamate synthase [NADPH] large chain.
  
  
 0.575
yciC
Putative metal chaperone YciC.
       0.561
AMY51945.1
Hypothetical protein.
       0.469
rtcB
RNA-splicing ligase RtcB.
       0.435
rpmG2_1
50S ribosomal protein L33 2; Belongs to the bacterial ribosomal protein bL33 family.
       0.410
AMY54483.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.