Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
idnTGnt-II system L-idonate transporter. (475 aa)    
Predicted Functional Partners:
ccl
(R)-citramalyl-CoA lyase.
  
    0.711
AMY51987.1
Putative 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.697
smtB_1
Succinyl-CoA--L-malate CoA-transferase beta subunit; Belongs to the CoA-transferase III family.
       0.682
AMY51991.1
Hypothetical protein.
       0.547
fruA
PTS system fructose-specific EIIABC component.
     
 0.544
gntZ
6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating.
 
  
 0.531
xylB_3
Xylulose kinase.
  
  
 0.467
gntK
Thermoresistant gluconokinase.
 
  
 0.460
pnbA_1
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
       0.401
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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