Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY52006.1Putative ABC transporter ATP-binding protein. (676 aa)    
Predicted Functional Partners:
ecfT
Energy-coupling factor transporter transmembrane protein EcfT.
 
 0.994
nikB_2
Nickel transport system permease protein NikB.
  
 
 0.937
AMY54390.1
Hypothetical protein.
  
     0.749
oppA
Oligopeptide-binding protein OppA.
  
 0.734
AMY54665.1
Putative peptide transport permease protein.
 
 
 0.653
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
    0.610
bioN
Energy-coupling factor transporter transmembrane protein BioN.
  
 
 0.609
AMY53115.1
Hypothetical protein.
  
     0.602
gsiD
Glutathione transport system permease protein GsiD.
  
 
 0.600
oppC
Oligopeptide transport system permease protein OppC.
  
 
 0.600
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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