sigD_2 protein (Rhodococcus fascians D188) - STRING interaction network

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sigD_2

ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)

Predicted Functional Partners:

rpoB

0.799

rpoC

0.799

rpoA

0.636

ripA_2

0.603

AMY53930.1

0.585

hsaD_1

0.555

sigE

0.520

AMY52023.1

0.518

lytC_2

0.508

sigH

0.500

Your Current Organism:

Rhodococcus fascians D188

NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMY52023.1	sigD_2	A3L23_00666	A3L23_00667	Hypothetical protein.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.518
AMY53930.1	sigD_2	A3L23_02593	A3L23_00667	Hypothetical protein.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.585
hsaD_1	sigD_2	A3L23_00668	A3L23_00667	4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.555
lytC_2	ripA_2	A3L23_04795	A3L23_04320	N-acetylmuramoyl-L-alanine amidase LytC.	Peptidoglycan endopeptidase RipA.	0.555
lytC_2	sigD_2	A3L23_04795	A3L23_00667	N-acetylmuramoyl-L-alanine amidase LytC.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.508
ripA_2	lytC_2	A3L23_04320	A3L23_04795	Peptidoglycan endopeptidase RipA.	N-acetylmuramoyl-L-alanine amidase LytC.	0.555
ripA_2	sigD_2	A3L23_04320	A3L23_00667	Peptidoglycan endopeptidase RipA.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.603
rpoA	rpoB	A3L23_00223	A3L23_02932	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	A3L23_00223	A3L23_02933	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	sigD_2	A3L23_00223	A3L23_00667	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.636
rpoA	sigE	A3L23_00223	A3L23_03112	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.788
rpoA	sigH	A3L23_00223	A3L23_00021	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily.	0.824
rpoB	rpoA	A3L23_02932	A3L23_00223	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	A3L23_02932	A3L23_02933	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	sigD_2	A3L23_02932	A3L23_00667	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.799
rpoB	sigE	A3L23_02932	A3L23_03112	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.872
rpoB	sigH	A3L23_02932	A3L23_00021	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigH; Belongs to the sigma-70 factor family. ECF subfamily.	0.916
rpoC	rpoA	A3L23_02933	A3L23_00223	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	A3L23_02933	A3L23_02932	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	sigD_2	A3L23_02933	A3L23_00667	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.799

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